[Bug 220767] lang/beignet: hangs if not linked against libpthread after jemalloc 5.0.0 update

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[Bug 220767] lang/beignet: hangs if not linked against libpthread after jemalloc 5.0.0 update

bugzilla-noreply
https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=220767

            Bug ID: 220767
           Summary: lang/beignet: hangs if not linked against libpthread
                    after jemalloc 5.0.0 update
           Product: Ports & Packages
           Version: Latest
          Hardware: Any
                OS: Any
            Status: New
          Keywords: needs-qa, regression
          Severity: Affects Only Me
          Priority: ---
         Component: Individual Port(s)
          Assignee: [hidden email]
          Reporter: [hidden email]
                CC: [hidden email], [hidden email],
                    [hidden email]
          Assignee: [hidden email]
             Flags: maintainer-feedback?([hidden email])

After base r319971 some applications not already linked against threading
library started to hang in [umtxn] state. It affects at least Beignet. However,
bisecting jemalloc as part of libc requires 8 steps of rebasing
FreeBSD-specific changes.

Maybe someone can suggest more apps to try that can trigger the issue.

$ pkg install clinfo beignet # requires bug 217635
$ LD_PRELOAD=/lib/libthr.so.3 clinfo # works fine
$ gdb clinfo
(gdb) r
Starting program: /usr/local/bin/clinfo
Number of platforms                               1
  Platform Name                                   Intel Gen OCL Driver
  Platform Vendor                                 Intel
  Platform Version                                OpenCL 2.0 beignet 1.3
  Platform Profile                                FULL_PROFILE
  Platform Extensions                            
cl_khr_global_int32_base_atomics cl_khr_global_int32_extended_atomics
cl_khr_local_int32_base_atomics cl_khr_local_int32_extended_atomics
cl_khr_byte_addressable_store cl_khr_3d_image_writes cl_khr_image2d_from_buffer
cl_khr_depth_images cl_khr_spir cl_khr_icd cl_intel_accelerator
cl_intel_subgroups cl_intel_subgroups_short cl_khr_gl_sharing
  Platform Extensions function suffix             Intel
[New LWP 102018 of process 60317]
^C
Thread 1 received signal SIGINT, Interrupt.
_umtx_op_err () at /usr/src/lib/libthr/arch/amd64/amd64/_umtx_op_err.S:37
37      RSYSCALL_ERR(_umtx_op)
(gdb) bt
#0  _umtx_op_err () at /usr/src/lib/libthr/arch/amd64/amd64/_umtx_op_err.S:37
#1  0x0000000803c579e4 in __thr_umutex_lock (mtx=0x803e7dc78
<_mutex_static_lock>, id=101914)
    at /usr/src/lib/libthr/thread/thr_umtx.c:80
#2  0x0000000803c61acc in _thr_umutex_lock (mtx=0x803e7dc78
<_mutex_static_lock>, id=101914)
    at /usr/src/lib/libthr/thread/thr_umtx.h:123
#3  0x0000000803c619b4 in init_static (thread=0x80068b000, mutex=0x801348e50)
    at /usr/src/lib/libthr/thread/thr_mutex.c:304
#4  0x0000000803c602f8 in check_and_init_mutex (mutex=0x801348e50,
m=0x7fffffff2de0)
    at /usr/src/lib/libthr/thread/thr_mutex.c:598
#5  0x0000000803c5f689 in __pthread_mutex_trylock (mutex=0x801348e50)
    at /usr/src/lib/libthr/thread/thr_mutex.c:614
#6  0x0000000800d656b9 in malloc_mutex_trylock_final (mutex=0x801348e10)
    at /usr/src/contrib/jemalloc/include/jemalloc/internal/mutex.h:144
#7  0x0000000800d59602 in malloc_mutex_lock (tsdn=0x80063c088,
mutex=0x801348e10)
    at /usr/src/contrib/jemalloc/include/jemalloc/internal/mutex.h:202
#8  0x0000000800d5b6b8 in __je_arena_tcache_fill_small (tsdn=0x80063c088,
arena=0x801344980,
    tcache=0x80063c240, tbin=0x80063c2e0, binind=6, prof_accumbytes=0) at
jemalloc_arena.c:1433
#9  0x0000000800cd7013 in __je_tcache_alloc_small_hard (tsdn=0x80063c088,
arena=0x801344980,
    tcache=0x80063c240, tbin=0x80063c2e0, binind=6,
tcache_success=0x7fffffff53f6)
    at jemalloc_tcache.c:93
#10 0x0000000800d8ea3e in tcache_alloc_small (tsd=0x80063c088,
arena=0x801344980,
    tcache=0x80063c240, size=96, binind=6, zero=true, slow_path=false)
    at /usr/src/contrib/jemalloc/include/jemalloc/internal/tcache_inlines.h:86
#11 arena_malloc (tsdn=0x80063c088, arena=0x0, size=96, ind=6, zero=true,
tcache=0x80063c240,
    slow_path=false) at
/usr/src/contrib/jemalloc/include/jemalloc/internal/arena_inlines_b.h:101
#12 iallocztm (tsdn=0x80063c088, size=96, ind=6, zero=true, tcache=0x80063c240,
is_internal=false,
    arena=0x0, slow_path=false)
    at
/usr/src/contrib/jemalloc/include/jemalloc/internal/jemalloc_internal_inlines_c.h:33
#13 imalloc_no_sample (sopts=0x7fffffff5300, dopts=0x7fffffff52d0,
tsd=0x80063c088, size=96,
    usize=96, ind=6) at jemalloc_jemalloc.c:1654
#14 imalloc_body (sopts=0x7fffffff5300, dopts=0x7fffffff52d0, tsd=0x80063c088)
    at jemalloc_jemalloc.c:1850
#15 imalloc (sopts=0x7fffffff5300, dopts=0x7fffffff52d0) at
jemalloc_jemalloc.c:1950
#16 __calloc (num=1, size=96) at jemalloc_jemalloc.c:2064
#17 0x0000000803c5fc0e in mutex_init (mutex=0x801348e50,
    mutex_attr=0x803e72758 <_pthread_mutexattr_default>, calloc_cb=0x800d8bea0
<__calloc>)
    at /usr/src/lib/libthr/thread/thr_mutex.c:292
#18 0x0000000803c619dc in init_static (thread=0x80068b000, mutex=0x801348e50)
    at /usr/src/lib/libthr/thread/thr_mutex.c:307
#19 0x0000000803c602f8 in check_and_init_mutex (mutex=0x801348e50,
m=0x7fffffff60d0)
    at /usr/src/lib/libthr/thread/thr_mutex.c:598
#20 0x0000000803c5f689 in __pthread_mutex_trylock (mutex=0x801348e50)
    at /usr/src/lib/libthr/thread/thr_mutex.c:614
#21 0x0000000800d656b9 in malloc_mutex_trylock_final (mutex=0x801348e10)
    at /usr/src/contrib/jemalloc/include/jemalloc/internal/mutex.h:144
#22 0x0000000800d59602 in malloc_mutex_lock (tsdn=0x80063c088,
mutex=0x801348e10)
    at /usr/src/contrib/jemalloc/include/jemalloc/internal/mutex.h:202
#23 0x0000000800d5b6b8 in __je_arena_tcache_fill_small (tsdn=0x80063c088,
arena=0x801344980,
    tcache=0x80063c240, tbin=0x80063c2e0, binind=6, prof_accumbytes=0) at
jemalloc_arena.c:1433
#24 0x0000000800cd7013 in __je_tcache_alloc_small_hard (tsdn=0x80063c088,
arena=0x801344980,
    tcache=0x80063c240, tbin=0x80063c2e0, binind=6,
tcache_success=0x7fffffff86d6)
    at jemalloc_tcache.c:93
#25 0x0000000800d72886 in tcache_alloc_small (tsd=0x80063c088,
arena=0x801344980,
    tcache=0x80063c240, size=88, binind=6, zero=false, slow_path=false)
    at /usr/src/contrib/jemalloc/include/jemalloc/internal/tcache_inlines.h:86
#26 arena_malloc (tsdn=0x80063c088, arena=0x0, size=88, ind=6, zero=false,
tcache=0x80063c240,
    slow_path=false) at
/usr/src/contrib/jemalloc/include/jemalloc/internal/arena_inlines_b.h:101
#27 iallocztm (tsdn=0x80063c088, size=88, ind=6, zero=false,
tcache=0x80063c240, is_internal=false,
    arena=0x0, slow_path=false)
    at
/usr/src/contrib/jemalloc/include/jemalloc/internal/jemalloc_internal_inlines_c.h:33
#28 imalloc_no_sample (sopts=0x7fffffff85e0, dopts=0x7fffffff85b0,
tsd=0x80063c088, size=88,
    usize=96, ind=6) at jemalloc_jemalloc.c:1654
#29 imalloc_body (sopts=0x7fffffff85e0, dopts=0x7fffffff85b0, tsd=0x80063c088)
    at jemalloc_jemalloc.c:1850
#30 imalloc (sopts=0x7fffffff85e0, dopts=0x7fffffff85b0) at
jemalloc_jemalloc.c:1950
#31 __malloc (size=88) at jemalloc_jemalloc.c:1981
#32 0x00000008033b81a8 in operator new (size=88) at
/usr/src/contrib/libc++/src/new.cpp:70
#33 0x000000080803aa89 in llvm::User::operator new(unsigned long, unsigned int)
()
   from /usr/local/lib/beignet//libgbe.so
#34 0x0000000806ea6b34 in
clang::CodeGen::CodeGenFunction::StartFunction(clang::GlobalDecl,
clang::QualType, llvm::Function*, clang::CodeGen::CGFunctionInfo const&,
clang::CodeGen::FunctionArgList const&, clang::SourceLocation,
clang::SourceLocation) () from /usr/local/lib/beignet//libgbe.so
#35 0x0000000806ea8551 in
clang::CodeGen::CodeGenFunction::GenerateCode(clang::GlobalDecl,
llvm::Function*, clang::CodeGen::CGFunctionInfo const&) () from
/usr/local/lib/beignet//libgbe.so
#36 0x0000000806eba8d9 in
clang::CodeGen::CodeGenModule::EmitGlobalFunctionDefinition(clang::GlobalDecl,
llvm::GlobalValue*) () from /usr/local/lib/beignet//libgbe.so
#37 0x0000000806eb6774 in
clang::CodeGen::CodeGenModule::EmitGlobalDefinition(clang::GlobalDecl,
llvm::GlobalValue*) () from /usr/local/lib/beignet//libgbe.so
#38 0x0000000806ebc322 in
clang::CodeGen::CodeGenModule::EmitTopLevelDecl(clang::Decl*) ()
   from /usr/local/lib/beignet//libgbe.so
#39 0x0000000806e3c82f in (anonymous
namespace)::CodeGeneratorImpl::HandleTopLevelDecl(clang::DeclGroupRef) () from
/usr/local/lib/beignet//libgbe.so
#40 0x0000000806e2fb85 in
clang::BackendConsumer::HandleTopLevelDecl(clang::DeclGroupRef) ()
   from /usr/local/lib/beignet//libgbe.so
#41 0x00000008077d0462 in clang::ParseAST(clang::Sema&, bool, bool) ()
   from /usr/local/lib/beignet//libgbe.so
#42 0x0000000806bdc2b9 in clang::FrontendAction::Execute() () from
/usr/local/lib/beignet//libgbe.so
#43 0x0000000806ba2cf1 in
clang::CompilerInstance::ExecuteAction(clang::FrontendAction&) ()
   from /usr/local/lib/beignet//libgbe.so
 std::__1::basic_string<char, std::__1::char_traits<char>,
std::__1::allocator<char> >, std::__1::basic_string<char,
std::__1::char_traits<char>, std::__1::allocator<char> >,
std::__1::vector<std::__1::basic_string<char, std::__1::char_traits<char>,
std::__1::allocator<char> >, std::__1::allocator<std::__1::basic_string<char,
std::__1::char_traits<char>, std::__1::allocator<char> > > >&, unsigned long,
char*, unsigned long*, unsigned int) () from /usr/local/lib/beignet//libgbe.so
#45 0x00000008067848b3 in gbe::programNewFromSource(unsigned int, char const*,
unsigned long, char const*, char*, unsigned long*) () from
/usr/local/lib/beignet//libgbe.so
#46 0x00000008019617c7 in cl_program_build (p=0x8006cd1c0, options=0x801992f4d
"")
    at src/cl_program.c:626
#47 0x0000000801952782 in clBuildProgram (program=0x8006cd1c0, num_devices=1,
    device_list=0x7fffffffe050, options=0x801992f4d "", pfn_notify=0x0,
user_data=0x0)
    at src/cl_api.c:835
#48 0x00000008019757b4 in cl_self_test (device=0x801bcf2a0
<intel_skl_gt2_device>,
    atomic_in_l3_flag=SELF_TEST_PASS) at src/cl_device_id.c:856
#49 0x0000000801975a3e in cl_get_device_ids (platform=0x801bcb3d8
<intel_platform_data>,
    device_type=4294967295, num_entries=0, devices=0x0,
num_devices=0x8007e8cf0)
    at src/cl_device_id.c:911
#50 0x00000008019554b3 in clGetDeviceIDs (platform=0x801bcb3d8
<intel_platform_data>,
    device_type=4294967295, num_entries=0, devices=0x0,
num_devices=0x8007e8cf0)
    at src/cl_api_device_id.c:43
#51 0x000000080083e065 in clGetDeviceIDs (platform=0x801bcb3d8
<intel_platform_data>,
    device_type=4294967295, num_entries=0, devices=0x0,
num_devices=0x8007e8cf0)
    at ocl_icd_loader_gen.c:58
#52 0x0000000000402341 in printPlatformInfo (p=0) at src/clinfo.c:459
#53 0x000000000040a3bd in main (argc=1, argv=0x7fffffffe2b8) at
src/clinfo.c:2676

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[Bug 220767] lang/beignet: hangs if not linked against libpthread after jemalloc 5.0.0 update

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https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=220767

--- Comment #1 from Jan Beich <[hidden email]> ---
Created attachment 184402
  --> https://bugs.freebsd.org/bugzilla/attachment.cgi?id=184402&action=edit
"bt full" output

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[Bug 220767] lang/beignet: hangs if consumer is not linked against libpthread after jemalloc 5.0.0 update

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In reply to this post by bugzilla-noreply
https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=220767

Jan Beich <[hidden email]> changed:

           What    |Removed                     |Added
----------------------------------------------------------------------------
            Summary|lang/beignet: hangs if not  |lang/beignet: hangs if
                   |linked against libpthread   |consumer is not linked
                   |after jemalloc 5.0.0 update |against libpthread after
                   |                            |jemalloc 5.0.0 update

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